Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

CA Colon Graudens Cluster Number 17 (63 genes) This page contains all miRNA mediated regulation and functional enrichment for CA Colon Graudens cluster number 17. Information about colon cancer can be found on Wikipedia, and further information about the "CA Colon Graudens" dataset can be found in Graudens et al., 2006. Inferred miRNA Mediated Regulation Weeder-miRvestigator PITA TargetScan zzz999 hsa-mir-642a hsa-mir-642b hsa-mir-597 Gene Ontology Enrichment GO ID GO Term Annotated Genes in Cluster GO:0006084 acetyl-CoA metabolic process 4 GO:0006091 generation of precursor metabolites and energy 13 GO:0006099 tricarboxylic acid cycle 4 GO:0006104 succinyl-CoA metabolic process 2 GO:0006119 oxidative phosphorylation 4 GO:0009060 aerobic respiration 5 GO:0009109 coenzyme catabolic process 4 GO:0015980 energy derivation by oxidation of organic compounds 12 GO:0022900 electron transport chain 7 GO:0022904 respiratory electron transport chain 7 GO:0045333 cellular respiration 10 GO:0046356 acetyl-CoA catabolic process 4 GO:0051187 cofactor catabolic process 4 Overlap Between miRNA Target Genes and Enriched Gene Ontology Annotations miRNA Method GO ID GO Term Overlap GO Annotated Genes Cluster Size miRNA Targets Genes P-Value hsa-mir-642a PITA GO:0006084 acetyl-CoA metabolic process 0 4 63 4 0.2359363 hsa-mir-642b PITA GO:0006084 acetyl-CoA metabolic process 0 4 63 4 0.2359363 hsa-mir-597 TargetScan GO:0006084 acetyl-CoA metabolic process 0 4 63 15 0.6733399 hsa-mir-642a PITA GO:0006091 generation of precursor metabolites and energy 0 13 63 4 0.6133733 hsa-mir-642b PITA GO:0006091 generation of precursor metabolites and energy 0 13 63 4 0.6133733 hsa-mir-597 TargetScan GO:0006091 generation of precursor metabolites and energy 1 13 63 15 0.8817439 hsa-mir-642a PITA GO:0006099 tricarboxylic acid cycle 0 4 63 4 0.2359363 hsa-mir-642b PITA GO:0006099 tricarboxylic acid cycle 0 4 63 4 0.2359363 hsa-mir-597 TargetScan GO:0006099 tricarboxylic acid cycle 0 4 63 15 0.6733399 hsa-mir-642a PITA GO:0006104 succinyl-CoA metabolic process 0 2 63 4 0.1239119 hsa-mir-642b PITA GO:0006104 succinyl-CoA metabolic process 0 2 63 4 0.1239119 hsa-mir-597 TargetScan GO:0006104 succinyl-CoA metabolic process 0 2 63 15 0.422427 hsa-mir-642a PITA GO:0006119 oxidative phosphorylation 0 4 63 4 0.2359363 hsa-mir-642b PITA GO:0006119 oxidative phosphorylation 0 4 63 4 0.2359363 hsa-mir-597 TargetScan GO:0006119 oxidative phosphorylation 0 4 63 15 0.6733399 hsa-mir-642a PITA GO:0009060 aerobic respiration 0 5 63 4 0.2877372 hsa-mir-642b PITA GO:0009060 aerobic respiration 0 5 63 4 0.2877372 hsa-mir-597 TargetScan GO:0009060 aerobic respiration 0 5 63 15 0.7563891 hsa-mir-642a PITA GO:0009109 coenzyme catabolic process 0 4 63 4 0.2359363 hsa-mir-642b PITA GO:0009109 coenzyme catabolic process 0 4 63 4 0.2359363 hsa-mir-597 TargetScan GO:0009109 coenzyme catabolic process 0 4 63 15 0.6733399 hsa-mir-642a PITA GO:0015980 energy derivation by oxidation of organic compounds 0 12 63 4 0.5804689 hsa-mir-642b PITA GO:0015980 energy derivation by oxidation of organic compounds 0 12 63 4 0.5804689 hsa-mir-597 TargetScan GO:0015980 energy derivation by oxidation of organic compounds 0 12 63 15 0.9738915 hsa-mir-642a PITA GO:0022900 electron transport chain 0 7 63 4 0.383395 hsa-mir-642b PITA GO:0022900 electron transport chain 0 7 63 4 0.383395 hsa-mir-597 TargetScan GO:0022900 electron transport chain 0 7 63 15 0.8669203 hsa-mir-642a PITA GO:0022904 respiratory electron transport chain 0 7 63 4 0.383395 hsa-mir-642b PITA GO:0022904 respiratory electron transport chain 0 7 63 4 0.383395 hsa-mir-597 TargetScan GO:0022904 respiratory electron transport chain 0 7 63 15 0.8669203 hsa-mir-642a PITA GO:0045333 cellular respiration 0 10 63 4 0.5084066 hsa-mir-642b PITA GO:0045333 cellular respiration 0 10 63 4 0.5084066 hsa-mir-597 TargetScan GO:0045333 cellular respiration 0 10 63 15 0.9488229 hsa-mir-642a PITA GO:0046356 acetyl-CoA catabolic process 0 4 63 4 0.2359363 hsa-mir-642b PITA GO:0046356 acetyl-CoA catabolic process 0 4 63 4 0.2359363 hsa-mir-597 TargetScan GO:0046356 acetyl-CoA catabolic process 0 4 63 15 0.6733399 hsa-mir-642a PITA GO:0051187 cofactor catabolic process 0 4 63 4 0.2359363 hsa-mir-642b PITA GO:0051187 cofactor catabolic process 0 4 63 4 0.2359363 hsa-mir-597 TargetScan GO:0051187 cofactor catabolic process 0 4 63 15 0.6733399

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.